Thanos Theocharidis

Thanos Theocharidis is the founder and director of Dot Red Games and the principal architect of the Dot Red Engine (DRE). He is the author of an AI related book; his interests also include Computer Graphics (GC) and Computer Science Parallelization principles, along with being a gym junkie. He is currently a Senior Research Developer & Project Manager of the BioLayout Express 3D project in Roslin Institute.

Recent publications:

1. EpiGPU: exhaustive pairwise epistasis scans parallelized on consumer level graphics cards.

Hemani G, Theocharidis A, Wei W, Haley C. Bioinformatics. 2011 Jun 1;27(11):1462-5. Epub 2011 Apr 6.PMID: 21471009

2. The mEPN scheme: an intuitive and flexible graphical system for rendering biological pathways.

Freeman TC, Raza S, Theocharidis A, Ghazal P. BMC Syst Biol. 2010 May 17;4:65.PMID: 20478018

3. Construction of a large scale integrated map of macrophage pathogen recognition and effector systems.

Raza S, McDerment N, Lacaze PA, Robertson K, Watterson S, Chen Y, Chisholm M, Eleftheriadis G, Monk S, O'Sullivan M, Turnbull A, Roy D, Theocharidis A, Ghazal P, Freeman TC. BMC Syst Biol. 2010 May 14;4:63.PMID: 20470404

4. Network visualization and analysis of gene expression data using BioLayout Express(3D).

Theocharidis A, van Dongen S, Enright AJ, Freeman TC. Nat Protoc. 2009;4(10):1535-50. Epub 2009 Oct 1.PMID: 19798086